Are bio-ontologies metaphysical theories?

Bio-ontologies are digital frameworks for handling biological and biomedical data. They consist of theoretical entities relations with explicitly defined logical structures precise definitions, whose purpose is to provide a shared language representing information be distributed integrated across diverse scientific contexts. It tempting view bio-ontologies as clear formal expressions community’s ontological commitments about their domain inquiry, integration tantamount the metaphysical unification science that some philosophers have envisaged. However, I argue local, practical, social technological factors influence design prevent us from straightforwardly reading conclusions them. discuss these complications suggest how they can overcome, revealing more general lessons development well-founded metaphysics.